Author

M. K. Yu

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3

Signature Assays, Organisms & Methods

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Organism:human· 3 Assay:metagenomics· 3 Research Focus:cell type annotation· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1

Frequent Co-Authors

A. M. Eren· 3 shared I. Veseli· 3 shared A. D. Willis· 2 shared A. R. Watson· 2 shared E. C. Fogarty· 2 shared K. Lolans· 2 shared M. S. Schechter· 2 shared A. Fernandez-Guerra· 1 shared

Activity by Year

2021-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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3 shared papersMicrobiology

A. M. Eren

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Author profile →

3 papers

Recent·Most cited

MicrobiologybioRxivMay 10, 2023

Microbes with higher metabolic independence are enriched in human gut microbiomes under stress

I. Veseli, Y. T. Chen, M. S. Schechter…·A. M. Eren

The paper identifies high metabolic independence as a marker of gut microbiome changes in IBD, using a software framework to analyze metagenomic data from healthy and IBD patients.

DOI 10.7554/elife.89862

humanmetagenomics

MicrobiologybioRxivPreprintMar 25, 2023

A highly conserved and globally prevalent cryptic plasmid is among the most numerous mobile genetic elements in the human gut

E. C. Fogarty, M. S. Schechter, K. Lolans…·A. M. Eren

The paper identifies a highly prevalent cryptic plasmid in the human gut that is more numerous than crAssphage and has potential applications in detecting fecal contamination and inflammatory states.

DOI 10.1101/2023.03.25.534219

humanmetagenomics

MicrobiologybioRxivMar 2, 2021

Metabolic independence drives gut microbialcolonization and resilience in health and disease

A. R. Watson, J. Fuessel, I. Veseli…·A. M. Eren

This study investigates how metabolic independence influences gut microbial colonization and resilience in health and disease using fecal microbiota transplantation.

DOI 10.1186/s13059-023-02924-x

humanmetagenomics