bioRxivBioinformaticsPreprint
quasitools: A Collection of Tools for Viral Quasispecies Analysis
Eric Marinier, Eric Enns, Camy Tran, Matthew Fogel, Cole W. PetersiD, Ahmed Kidwai, Hezhao JiiD, Gary Van DomselaariD
Abstract
Summaryquasitools is a collection of newly-developed, open-source tools for analyzing viral quasispcies data. The application suite includes tools with the ability to create consensus sequences, call nucleotide, codon, and amino acid variants, calculate the complexity of a quasispecies, and measure the genetic distance between two similar quasispecies. These tools may be run independently or in user-created workflows.\n\nAvailabilityThe quasitools suite is a freely available application licensed under the Apache License, Version 2.0. The source code, documentation, and file specifications are available at: https://phac-nml.github.io/quasitools/\n\nContactgary.vandomselaar@canada.ca
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