RETROFIT: REFERENCE-FREE DECONVOLUTION OF CELL-TYPE MIXTURES IN SPATIAL TRANSCRIPTOMICS
Roopali Singh, Xi He, Xinyue Wang, A Park, Ross C. Hardison, Xiang Zhu, Qunhua Li
RETROFIT deconvolves cell-type mixtures in spatial transcriptomics without requiring references, outperforming existing methods and matching reference-based approaches when references are imperfect.
Nature Communications · Jul 24, 2026Peer-reviewedBioinformatics