Author

Abdul Munif

The University of Western Australia

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Bioinformatics· 1

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Assay:ChIP-seq· 1 Approach:contrastive learning· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Approach:machine learning (classical)· 1

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Amitava DattaiD· 1 shared Max WardiD· 1 shared Zhaoyu LiiD· 1 shared

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1 paper

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BioinformaticsbioRxivPreprintSep 4, 2025

A novel deep learning method using contrastive learning enables interpretable outputs from relationships between gene expression and histone modification

Abdul Munif, Amitava Datta, Zhaoyu Li, Max Ward

The paper introduces a deep learning method using contrastive learning to predict gene expression from histone modifications without arbitrary thresholds, showing consistent performance across datasets.

DOI 10.1101/2025.09.04.674139

ChIP-seqcontrastive learning