Author

Alexander Katko

Cincinnati Children's Hospital Medical Center

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Systems Biology· 2

Signature Assays, Organisms & Methods

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Research Focus:gene regulatory network inference· 2 Organism:human· 2 Assay:scRNA-seq· 2 Approach:statistical model· 2 Assay:ATAC-seq· 1 Assay:GWAS summary statistics· 1 Assay:snRNA-seq· 1

Frequent Co-Authors

Akshata N. Rudrapatna· 2 shared Anthony T. BejjaniiD· 2 shared Emily R. MiraldiiD· 2 shared Joseph A. Wayman· 2 shared Leah Claire KottyaniD· 2 shared Zi F. YangiD· 2 shared Alec P. PankowiD· 1 shared Allison BoboltziD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 42 mutual co-author links

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2 shared papersSystems Biology

Akshata N. Rudrapatna

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2 papers

Recent·Most cited

Gene regulatory networks define human airway epithelial cell types and their distinct responses to type I interferon

Anthony T. Bejjani, Alec P. Pankow, Ava R. Lamberty, Jorg J. A. Calis, Kira A. Griswold, Ethan Iverson, Andy Kuo, Akshata N. Rudrapatna, Skyler A. Uhl, Roosheel S. Patel, Oded Danziger, Philip Cohen, Erika A. Barrall, Emma J. DeGrace, Fady Gorgy, , Emily R. Miraldi

The paper characterizes gene regulatory networks in human airway epithelial cells and identifies cell type-specific responses to type I interferon.

bioRxiv · May 13, 2026 · PreprintSystems Biology

Gene regulatory network determinants of rapid recall in human memory CD4+ T cells

Alexander Katko, Svetlana Korinfskaya, Anthony T. Bejjani, Seyifunmi M. Owoeye, Zi F. Yang, Akshata N. Rudrapatna, Sarah Potter, Joseph A. Wayman, Michael Kotliar, Leah Claire Kottyan, Artem Barski, Emily R. Miraldi

This study identifies gene regulatory networks in human memory CD4+ T cells that drive rapid recall, linking specific transcription factors to immune-mediated disease risk.

Cell Reports · Mar 21, 2026Peer-reviewedSystems Biology