Author

Andre Kahles

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Bioinformatics· 2 Cancer Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:differential expression· 3 Assay:bulk RNA-seq· 2 Approach:deep learning· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Gunnar RätschiD· 3 shared Cheng Soon Ong· 1 shared Cyriac Kandoth· 1 shared Jonas Behr· 1 shared Kjong-Van LehmanniD· 1 shared Nikolaus SchultziD· 1 shared Oliver StegleiD· 1 shared William Lee· 1 shared

Activity by Year

2014-2016 · peak 1/yr

Co-Author Collaboration Network

9 top collaborators · 19 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersBioinformatics

Gunnar RätschORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

SplAdder: Identification, quantification and testing of alternative splicing events from RNA-Seq data

Andre Kahles, Cheng Soon Ong, Yi Zhong, Gunnar Rätsch

SplAdder identifies, quantifies, and tests alternative splicing events from RNA-Seq data, improving annotation and analysis of transcriptome diversity.

Bioinformatics · Jun 15, 2016Peer-reviewedBioinformatics

MMR: A Tool for Read Multi-Mapper Resolution

Andre Kahles, Jonas Behr, Gunnar Rätsch

MMR improves transcript quantification and reduces alignment file size by resolving multi-mapper reads based on coverage density.

Bioinformatics · Oct 30, 2015Peer-reviewedBioinformatics

Integrative Genome-wide Analysis of the Determinants of RNA Splicing in Kidney Renal Clear Cell Carcinoma

Kjong-Van Lehmann, Andre Kahles, Cyriac Kandoth, William Lee, Nikolaus Schultz, Oliver Stegle, Gunnar Rätsch

The paper analyzes RNA splicing patterns in kidney renal clear cell carcinoma patients to identify tumor-specific isoforms and splicing quantitative trait loci associated with disease.

bioRxiv · Oct 19, 2014Cancer Biology