Cell2Sentence: Teaching Large Language Models the Language of Biology
Daniel M. Levine, Syed Asad Rizvi, Sacha Lévy, Nazreen Pallikkavaliyaveetil, David Zhang, Xingyu Chen, Sina Ghadermarzi, Ruiming Wu, Zihe Zheng, Ivan Vrkic, Anna Zhong, Daphne Raskin, Insu Han, Antonio Henrique de Oliveira Fonseca, Josue Ortega Caro, , David van Dijk
Cell2Sentence converts single-cell gene expression profiles into text-like cell sentences so standard large language models like GPT-2 can be fine-tuned for cell generation and cell-type annotation.
bioRxiv · Sep 11, 2023 · PreprintBioinformatics