Author

Benjamin Kaufman

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Approach:diffusion model· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Research Focus:genome assembly· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Bryan Lee· 1 shared Carl UnderkoffleriD· 1 shared Chad M. HayesiD· 1 shared Christopher Olson· 1 shared Daniel CrozieriD· 1 shared Doreen WareiD· 1 shared Edward WilliamsiD· 1 shared Gloria B. BurowiD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperBioinformatics

Bryan Lee

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2 papers

Recent·Most cited

Development and evaluation of a cost-effective, mid-density SNP array as a sorghum community genotyping resource

Vivek Kumar, Robert R. Klein, Benjamin Kaufman, Noah D. Winans, Daniel Crozier, William L. Rooney, Melanie L. Harrison, Chad M. Hayes, Marcela Karey Tello-Ruiz, Nicholas P. Gladman, Christopher Olson, Gloria B. Burow, Sarah A. Sexton-Bowser, Somashekhar M. Punnuri, Joseph Edward Knoll, , Doreen Ware

The paper develops and validates a mid-density SNP array for sorghum using NGS, showing it performs as well as high-density GBS for trait prediction and breeding applications.

bioRxiv · Feb 23, 2026 · PreprintPlant Biology

Latent Diffusion For Conditional Generation of Molecules

Benjamin Kaufman, Edward Williams, Ryan D. Pederson, Carl Underkoffler, Zahid Panjwani, Miles Wang-Henderson, Narbe Mardirossian, Matthew H. Katcher, Zack Strater, Jean-Marc Grandjean, Bryan Lee, John Parkhill

This paper introduces COATI-LDM, a latent diffusion model for generating drug-like small molecules with desired properties, showing improved control and diversity over existing methods.

bioRxiv · Aug 22, 2024 · PreprintBioinformatics