Author

Benjamin P Howden

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Assay:whole-genome sequencing· 2 Approach:experimental assay· 1 Organism:human· 1 Research Focus:phylogenetics / evolution· 1 Research Focus:software / tool· 1 Approach:statistical model· 1

Frequent Co-Authors

Anders Gonçalves da SilvaiD· 1 shared Carl Jeffries· 1 shared Corinne N Thompson· 1 shared Deborah A Williamson· 1 shared Duong Vu Thuy· 1 shared Duy Pham ThanhiD· 1 shared Guy E Thwaites· 1 shared Hao Chung TheiD· 1 shared

Activity by Year

2016-2016 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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1 shared paperGenomics

Anders Gonçalves da SilvaORCID

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2 papers

Recent·Most cited

NGMASTER: in silico Multi-Antigen Sequence Typing for Neisseria gonorrhoeae

Jason C Kwong, Anders Gonçalves da Silva, Kristin Dyet, Deborah A Williamson, Timothy P Stinear, Benjamin P Howden, Torsten Seemann

NGMASTER enables in silico NG-MAST analysis of Neisseria gonorrhoeae genomes, comparing results with prior epidemiological studies.

bioRxiv · Jun 9, 2016Genomics

South Asia as a reservoir for the global spread of ciprofloxacin resistant Shigella sonnei

Hao Chung The, Maia A Rabaa, Duy Pham Thanh, Niall De Lappe, Martin Cormican, Benjamin P Howden, Sonam Wangchuk, Ladaporn Bodhidatta, Carl Jeffries, To Nguyen Thi Nguyen, Duong Vu Thuy, Corinne N Thompson, Nguyen Phu Huong Lan, Phat Voong Vinh, Tuyen Ha Thanh, , Stephen Baker

This study identifies South Asia as the primary source of ciprofloxacin-resistant Shigella sonnei, showing a single clonal emergence event driving global spread.

bioRxiv · Feb 25, 2016Microbiology