Author

Bin Xie

Illinois Institute of Technology

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Same name, identified by ORCID

Biology Disciplines

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Bioinformatics· 2 Genetics· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Assay:imaging· 2 Organism:plant (other)· 2 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Assay:metabolomics· 1 Research Focus:software / tool· 1 Research Focus:spatial domain detection· 1

Frequent Co-Authors

Bin DuaniD· 2 shared Dawen CaiiD· 2 shared Logan A. WalkeriD· 2 shared Wei Jie LeeiD· 2 shared Yan YaniD· 2 shared Alexander Lin· 1 shared Bingshu HeiD· 1 shared Chen Lv· 1 shared

Activity by Year

2021-2024 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 17 mutual co-author links

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2 shared papersBioinformatics

Bin DuanORCID

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

A browser-based platform for storage, visualization, and analysis of large-scale 3D images in HPC environments

Logan A. Walker, Wei Jie Lee, Bin Duan, Menelik Weatherspoon, Ye Li, Fred Y. Shen, Mou-Chi Cheng, Xiaoman Niu, Jacob Eggerd, Bin Xie, Jimmy Hon Pong Cheng, Humphrey Xu, Xiao-Xiang Zhong, Hehai Jiang, Meng Cui, , Dawen Cai

The paper develops a platform for storing, visualizing, and analyzing large-scale 3D images in HPC environments using a scalable storage format and web-based annotation tools.

bioRxiv · Oct 4, 2024 · PreprintBioinformatics

A novel OsIAA3-OsARF16-OsBUL1 module regulates grain size in rice

Fengjun Xian, Shuya Liu, Jishuai Huang, Bin Xie, Lin Zhu, Qiannan Zhang, Chen Lv, Yangqian Xu, Xinrong Zhang, Jun Hu

The paper identifies a novel OsIAA3-OsARF16-OsBUL1 module that regulates grain size in rice by modulating cell expansion and proliferation.

bioRxiv · Sep 19, 2024 · PreprintGenetics

Artifact-Minimized High-Ratio Image Compression with Preserved Analysis Fidelity

Bin Duan, Logan A. Walker, Bin Xie, Wei Jie Lee, Alexander Lin, Yan Yan, Dawen Cai

This paper develops a compression method that achieves high compression ratios with minimal visual and quantitative errors for single-molecule imaging data.

bioRxiv · Jul 17, 2024 · PreprintBioinformatics

Multidimensional molecular differences between artificial and wild Artemisia rupestris L.

Zhi Zhou, Bin Xie, Bingshu He, Chen Zhang, Lulu Chen, Zhonghua Wang, Yanhua Chen, Zeper Abliz

A metabolomics-transcriptomics study comparing artificial and wild Artemisia rupestris L. to identify molecular differences and their genetic basis.

bioRxiv · Feb 26, 2021 · PreprintSystems Biology