Author

Botond Sipos

Primary ORCID profile (0000-0002-9046-3302 · 3 papers)Unclaimed ORCID profile · follow to get notified of new preprints

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Botond SiposiD3 papers · European Bioinformatics Institute

Biology Disciplines

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Genomics· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Assay:long-read sequencing· 1 Research Focus:variant calling· 1 Organism:yeast· 1

Frequent Co-Authors

Adrian M Stütz· 1 shared Andrew J Heron· 1 shared Anthony Warland· 1 shared Chris Wright· 1 shared Daniel J Turner· 1 shared Daniel Jachimowicz· 1 shared Daniel R Garalde· 1 shared Elizabeth A Snell· 1 shared

Activity by Year

2016-2016 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperMolecular Biology

Adrian M Stütz

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2 papers

Recent·Most cited

Highly parallel direct RNA sequencing on an array of nanopores

Daniel R Garalde, Elizabeth A Snell, Daniel Jachimowicz, Andrew J Heron, Mark Bruce, Joseph Lloyd, Anthony Warland, Nadia Pantic, Tigist Admassu, Jonah Ciccone, Sabrina Serra, Jemma Keenan, Samuel Martin, Luke McNeill, Jayne Wallace, , Daniel J Turner

This paper demonstrates direct RNA sequencing using an array of nanopores, offering advantages over traditional RNA-seq methods by avoiding amplification and reverse transcription biases.

bioRxiv · Aug 12, 2016Genomics

PASP - a whole-transcriptome poly(A) tail length determination assay for the Illumina platform

Botond Sipos, Adrian M Stütz, Greg Slodkowicz, Tim Massingham, Jan Korbel, Nick Goldman

PASP measures poly(A) tail lengths across the transcriptome using Illumina sequencing, showing reliable results in yeast with potential for broader application.

bioRxiv · Jun 21, 2016 · PreprintMolecular Biology