Author

Cong Liu

Okinawa Institute of Science and Technology Graduate University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Biology Disciplines

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Bioinformatics· 1 Microbiology· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Research Focus:gene regulatory network inference· 1 Assay:long-read sequencing· 1 Approach:machine learning (classical)· 1 Assay:metagenomics· 1

Frequent Co-Authors

Anna ProkhorovaiD· 1 shared Changmou XuiD· 1 shared Gaku TokudaiD· 1 shared Guangshun WangiD· 1 shared Jan ŠobotníkiD· 1 shared Jieqiong WangiD· 1 shared Jinzhi LeiiD· 1 shared Junxi Feng· 1 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 14 mutual co-author links

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1 shared paperMicrobiology

Anna ProkhorovaORCID

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3 papers

Recent·Most cited

High-fidelity long-read metagenomics reveals the metabolic functions of dominant termite gut bacteria

Anna Prokhorova, Cong Liu, В А Емельяненко, Soma Sardar Barawi, Simon Hellemans, Jan Šobotník, Gaku Tokuda, Yuichi Hongoh, Thomas Bourguignon

This study uses high-fidelity long-read metagenomics to reconstruct genomes of dominant termite gut bacteria and reveals their lineage-specific metabolic functions.

bioRxiv · Oct 8, 2026 · PreprintMicrobiology

SAMP: Identifying Antimicrobial Peptides by an Ensemble Learning Model Based on Proportionalized Split Amino Acid Composition

Junxi Feng, Mengtao Sun, Cong Liu, Weiwei Zhang, Changmou Xu, Jieqiong Wang, Guangshun Wang, Shibiao Wan

SAMP identifies antimicrobial peptides using an ensemble model with new features, outperforming existing methods on multiple datasets.

Briefings in Functional Genomics · Nov 1, 2024Peer-reviewedBioinformatics

Macroscopic dynamics of gene regulatory networks revealed by individual entropy

Cong Liu, Lijie Hao, Jinzhi Lei

This paper introduces individual entropy as a macroscopic variable to quantify transcriptional dynamics in gene regulatory networks and shows its utility in characterizing transitions from order to disorder.

International Journal of Modern Physics B · Dec 23, 2021Peer-reviewedSystems Biology