Author

Daniel Capurso

The Jackson Laboratory for Genomic Medicine

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 2 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Assay:ChIP-seq· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:deconvolution· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Assay:Hi-C· 1

Frequent Co-Authors

Byoungkoo LeeiD· 3 shared Meizhen ZhengiD· 3 shared Minji KimiD· 3 shared Simon Zhongyuan TianiD· 3 shared Yijun RuaniD· 3 shared Chee‐Hong WongiD· 1 shared Chew Yee NganiD· 1 shared Chia‐Lin WeiiD· 1 shared

Activity by Year

2018-2019 · peak 2/yr

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10 top collaborators · 45 mutual co-author links

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3 shared papersGenomics

Byoungkoo LeeORCID

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3 papers

Recent·Most cited

Multiplex chromatin interaction analysis by signal processing and statistical algorithms

Minji Kim, Meizhen Zheng, Simon Zhongyuan Tian, Daniel Capurso, Byoungkoo Lee, Jeffrey H. Chuang, Yijun Ruan

The paper introduces MIA-Sig, an algorithm to de-noise chromatin interaction data and identify topological domains and inter-domain contacts.

Genome biology · Nov 25, 2019Peer-reviewedGenomics

ChIA-DropBox: a novel analysis and visualization pipeline for multiplex chromatin interactions

Simon Zhongyuan Tian, Daniel Capurso, Minji Kim, Byoungkoo Lee, Meizhen Zheng, Yijun Ruan

ChIA-DropBox is a computational pipeline for analyzing ChIA-Drop data, reconstructing chromatin complexes, and visualizing multiplex chromatin interactions.

bioRxiv · Apr 18, 2019 · PreprintBioinformatics

Multiplex Chromatin Interaction Analysis with Single-Molecule Precision

Meizhen Zheng, Simon Zhongyuan Tian, Rahul Maurya, Byoungkoo Lee, Minji Kim, Daniel Capurso, Emaly Piecuch, Liang Gong, Jacqueline Jufen Zhu, Chee‐Hong Wong, Chew Yee Ngan, Ping Wang, Xiaoan Ruan, Chia‐Lin Wei, Yijun Ruan

This paper introduces a method to analyze multiplex chromatin interactions with single-molecule precision and shows they contribute to topologically associated domains and gene regulation.

bioRxiv · Jan 25, 2018 · PreprintGenomics