Author

Daqian Wang

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Assay:long-read sequencing· 2 Approach:transformer / foundation model· 2 Approach:deep learning· 1 Research Focus:software / tool· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Chen Sun· 2 shared Jizhong LouiD· 2 shared Qingwen LiiD· 2 shared

Activity by Year

2024-2024 · peak 2/yr

Co-Author Collaboration Network

3 top collaborators · 3 mutual co-author links

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2 shared papersBioinformatics

Chen Sun

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2 papers

Recent·Most cited

GCRTcall: a Transformer based basecaller for nanopore RNA sequencing enhanced by gated convolution and relative position embedding via joint loss training

Qingwen Li, Chen Sun, Daqian Wang, Jizhong Lou

GCRTcall improves RNA basecalling accuracy using a Transformer with gated convolution and relative position embedding, achieving state-of-the-art performance.

Frontiers in Genetics · Nov 22, 2024Peer-reviewedBioinformatics

BaseNet: A Transformer-Based Toolkit for Nanopore Sequencing Signal Decoding

Qingwen Li, Chen Sun, Daqian Wang, Jizhong Lou

This paper introduces BaseNet, a transformer-based toolkit for nanopore sequencing signal decoding, showing improved accuracy through autoregressive and non-autoregressive decoding mechanisms.

Computational and Structural Biotechnology Journal · Sep 25, 2024Peer-reviewedBioinformatics