Author

David Conant

Synthego (United States)

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Research Focus:software / tool· 2 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Approach:experimental assay· 1 Organism:human· 1 Approach:statistical model· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Brittany L. Enzmann· 1 shared Edward Chang· 1 shared Joyce L. YangiD· 1 shared Kelsey Waite· 1 shared Kevin HoldeniD· 1 shared Kristofer Bouchard· 1 shared Nicholas Rossi· 1 shared Oliver Rübel· 1 shared

Activity by Year

2015-2019 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperBioinformatics

Brittany L. Enzmann

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2 papers

Recent·Most cited

Inference of CRISPR Edits from Sanger Trace Data

Tim Hsiau, David Conant, Nicholas Rossi, Travis J. Maures, Kelsey Waite, Joyce L. Yang, Sahil Joshi, Reed Kelso, Kevin Holden, Brittany L. Enzmann, Rich Stoner

ICE regresses simulated edit traces onto Sanger reads to quantify indels, multi-guide and knock-in edits without tuning, correlating with amplicon sequencing (r2 = 0.93) and TIDE (r2 = 0.99).

bioRxiv · Aug 10, 2019 · PreprintBioinformatics✦ In-depth digest

BRAINformat: A Data Standardization Framework for Neuroscience Data

Oliver Rübel, Prabhat, Peter Denes, David Conant, Edward Chang, Kristofer Bouchard

The paper introduces BRAINformat, a data standardization framework for neuroscience data, enabling portable, scalable, and self-describing storage through HDF5-based modules and semantic relationships.

bioRxiv · Aug 13, 2015 · PreprintNeuroscience