Author

E. Lundgren

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 3

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Organism:human· 2 Assay:bulk RNA-seq· 1 Assay:DNA methylation· 1 Research Focus:host-pathogen & immune response· 1 Research Focus:phylogenetics / evolution· 1

Frequent Co-Authors

E. Romero-Severson· 2 shared T. Leitner· 2 shared E. E. Goldberg· 1 shared J. Albert· 1 shared P. L. Ralph· 1 shared

Activity by Year

2019-2023 · peak 1/yr

Co-Author Collaboration Network

5 top collaborators · 5 mutual co-author links

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2 shared papersEvolutionary Biology

E. Romero-Severson

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3 papers

Recent·Most cited

Inferring viral transmission time from phylogenies for known transmission pairs

E. E. Goldberg, E. Lundgren, E. Romero-Severson, T. Leitner

This paper develops a Markov model to infer HIV transmission times from phylogenies and finds it provides accurate and narrower estimates compared to existing methods.

bioRxiv · Sep 12, 2023Evolutionary Biology

Combining biomarker and virus phylogenetic models improves epidemiological source identification

E. Lundgren, E. Romero-Severson, J. Albert, T. Leitner

This paper develops a method that combines HIV biomarkers with phylogenetic analysis to improve the accuracy of identifying transmission sources in HIV epidemics.

bioRxiv · Dec 13, 2021 · PreprintEvolutionary Biology

Are populations like a circuit? Comparing isolation by resistance to a new coalescent-based method

E. Lundgren, P. L. Ralph

The paper compares resistance distance and coalescence time models for inferring population movement and size, finding coalescence-based methods more accurate in realistic scenarios.

bioRxiv · Apr 22, 2019Evolutionary Biology