Hayan Lee

Third-generation sequencing and the future of genomics

This paper discusses third-generation sequencing technologies and their potential to improve genome assembly, structural variation analysis, and haplotype phasing.

Error correction and assembly complexity of single molecule sequencing reads.

This paper evaluates the impact of long-read sequencing on genome assembly across multiple species and introduces a new error correction algorithm and predictive model.

SplitMEM: Graphical pan-genome analysis with suffix skips

SplitMEM constructs compressed de Bruijn graphs for pan-genomes efficiently, revealing core genome properties in Bacillus anthracis and Escherichia coli strains.

New whole genome de novo assemblies of three divergent strains of rice (O. sativa) documents novel gene space of aus and indica

The paper presents de novo genome assemblies of three rice strains, revealing novel gene spaces and structural variations not captured by reference-based resequencing.