Author

Hui Wan

Yale UniversityPrimary ORCID profile (0000-0002-4368-8672 · 1 paper)Unclaimed ORCID profile · follow to get notified of new preprints

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Hui WaniD1 paper · Karolinska Institutet

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Approach:benchmark study· 1 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Organism:human· 1 Assay:perturbation screen· 1 Assay:scRNA-seq· 1 Research Focus:software / tool· 1 Research Focus:spatial domain detection· 1

Frequent Co-Authors

Jade Xiaoqing WangiD· 1 shared Jinxi XiangiD· 1 shared Penghui YangiD· 1 shared Siyu HouiD· 1 shared Wenjing MaiD· 1 shared Xiang ZhouiD· 1 shared Ying MaiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 21 mutual co-author links

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1 shared paperBioinformatics

Jade Xiaoqing WangORCID

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1 paper

Recent·Most cited

Accessible and reproducible deployment reveals the practical boundaries of single-cell foundation models

Siyu Hou, Penghui Yang, Wenjing Ma, Jinxi Xiang, Jade Xiaoqing Wang, Hui Wan, Ying Ma, Xiang Zhou

Across 13 single-cell foundation models and 94 datasets, PCA and established methods usually match or beat them; pretrained embeddings help mainly with scarce labels, rare cells and open-set detection.

bioRxiv · Sep 2, 2026 · PreprintBioinformatics✦ In-depth digest