Integrating Nanopore MinION Sequencing into National Animal Health AMR Surveillance Programs: An Indonesian Pilot Study of Chicken Slaughterhouse Effluent and Rivers
Rallya Telussa, Puji Rahayu, Thufeil Yunindika, Curtis James Kapsak, Kanti Puji Rahayu, Oli Susanti, Imron Suandy, Nuraini Triwijayanti, Aji Barbora Niasono, Syamsul Maarif, Hendra Wibawa, Lestari Lestari, Gunawan B. Utomo, Farida Camallia Zenal, Luuk Schoonman, Lee E. Voth‐Gaeddert
This study evaluates the integration of Nanopore MinION sequencing into a national AMR surveillance program, comparing its cost-benefit and effectiveness with other methods for monitoring antibiotic-resistant E. coli in slaughterhouse effluent and rivers.
Antibiotics · Jun 20, 2025Peer-reviewedMolecular Biology