Author

Jarryd Martin

The University of Melbourne

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:cell-cell communication· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Organism:human· 1 Research Focus:imputation· 1 Assay:proteomics· 1 Research Focus:spatial domain detection· 1 Assay:spatial transcriptomics· 1

Frequent Co-Authors

Melissa J. DavisiD· 2 shared Ahmed MohamediD· 1 shared Andrew Ian WebbiD· 1 shared Arutha KulasingheiD· 1 shared Chin Wee TaniD· 1 shared Dharmesh Dinesh BhuvaiD· 1 shared Fuyi LiiD· 1 shared Jinjin CheniD· 1 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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2 shared papersBioinformatics

Melissa J. DavisORCID

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2 papers

Recent·Most cited

hoodscanR: profiling single-cell neighborhoods in spatial transcriptomics data

Ning Liu, Jarryd Martin, Dharmesh Dinesh Bhuva, Jinjin Chen, Mengbo Li, Sam Lee, Malvika Kharbanda, Jinming Cheng, Ahmed Mohamed, Arutha Kulasinghe, Yunshun Chen, Chin Wee Tan, Fuyi Li, Jose Maria Polo, Melissa J. Davis

hoodscanR identifies and analyzes cell neighborhoods in spatial transcriptomics data, revealing transcriptional differences in tumor cells across neighborhoods.

Bioinformatics · Aug 1, 2026Peer-reviewedBioinformatics

PIPP: Improving peptide identity propagation using neural networks

Soroor Hediyeh-zadeh, Jarryd Martin, Melissa J. Davis, Andrew Ian Webb

The paper introduces an embedding-based method for peptide identity propagation that improves missing value reduction and false discovery rate estimation in mass spectrometry data.

bioRxiv · Dec 5, 2021 · PreprintBioinformatics