Author

Jaya Thomas

Cancer Research UK

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Immunology· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Approach:experimental assay· 2 Organism:human· 2 Assay:bulk RNA-seq· 1 Assay:imaging· 1 Research Focus:spatial domain detection· 1 Assay:spatial transcriptomics· 1

Frequent Co-Authors

A.G. BaileyiD· 1 shared Adam SzmuliD· 1 shared Aiman Alzetani· 1 shared Andres F. Vallejo· 1 shared Arjun S. Takhar· 1 shared Aurelie Fabre· 1 shared Ben G. Marshall· 1 shared Ben NicholasiD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperImmunology

A.G. BaileyORCID

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Author profile →

2 papers

Recent·Most cited

Three-dimensional mapping of human lung fibrosis identifies spatial coupling between tissue microarchitecture and maladaptive repair states

Joseph A. Bell, Stephanie K. Robinson, Robert Pedley, Gautam Ahuja, Adam Szmul, Ian Reddin, Jaya Thomas, Jeanette Norman, Sonya James, Philip J. Basford, Victor Barozi, Dipanjan Bhattacharya, James G. H. Parkin, Rebekah Allen, Lucy N. Sayer, , Mark G. Jones

This study maps human lung fibrosis in 3D, showing how structural changes in tissue microarchitecture drive maladaptive repair states and disease progression.

bioRxiv · Nov 8, 2026 · PreprintSystems Biology

Identification of pre-existing ubiquitous neoantigen-reactive tumor-infiltrating T-cells in a patient with metastatic pancreatic neuroendocrine tumor

Jean‐Benoit Tanis, Katy J. McCann, Francisco Emmanuel Castañeda-Castro, Jaya Thomas, A.G. Bailey, Prabhat Singh, Eve Currall, Lindsey Chudley, Hayley A. Simon, Ben Nicholas, Judith Cave, Arjun S. Takhar, Susanne Burdak‐Rothkamm, Stephen Philip Schoenberger, Jason Greenbaum, , Christian H. H. Ottensmeier

This study identifies a ubiquitous neoantigen-reactive T-cell response across multiple metastatic sites in a patient with pancreatic neuroendocrine tumor, supporting the use of mutation-sharing status for neoantigen selection in immunotherapy.

bioRxiv · Aug 4, 2026 · PreprintImmunology