Author

John Rohde

Allen Institute

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Neuroscience· 3

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Organism:mouse· 3 Assay:imaging· 2 Research Focus:spatial domain detection· 2 Organism:human· 1 Organism:non-human primate· 1

Frequent Co-Authors

Adam K. GlaseriD· 3 shared Jayaram V. ChandrashekariD· 3 shared Karel SvobodaiD· 3 shared Bosiljka TasiciD· 2 shared Cameron ArshadiiD· 2 shared David H. FengiD· 2 shared Di Wang· 2 shared Holly MyersiD· 2 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersNeuroscience

Adam K. GlaserORCID

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3 papers

Recent·Most cited

3D-MAESTRO: A scalable, modular, portable pipeline for automated processing of large-scale volumetric brain microscopy data

Camilo Laiton-Bonadiez, Nicholas A. Lusk, Yoni Browning, Mathew Summers, Michael J. Taormina, Di Wang, Joshua H. Siegle, Holly Myers, Bowen Tan, Polina Kosillo, Erica Peterson, Daphne Toglia, Anna A. Lakunina, Sasha Burckhardt, Mekhla Kapoor, , Karel Svoboda

3D-MAESTRO automates processing of large-scale volumetric brain microscopy data, enabling scalable and reproducible analysis of mouse brain structures.

bioRxiv · Sep 25, 2026 · PreprintNeuroscience

Topographic structure and function of locus coeruleus norepinephrine neurons

Zhixiao Su, Polina Kosillo, Kanghoon Jung, Shuonan Chen, Mathew T. Summers, Alex T. Piet, Han Hou, Kenta M. Hagihara, Drew Friedmann, Olivia Ho-Shing, Matthew I. Becker, Thomas Chartrand, Peter Grotz, Ella Hilton-VanOsdall, Margaret Lee, , Jeremiah Y. Cohen

The paper identifies topographic organization in locus coeruleus norepinephrine neurons, linking their morphology, gene expression, and activity to specific brain regions and learning-related behaviors.

bioRxiv · Apr 10, 2026 · PreprintNeuroscience

Expansion-assisted selective plane illumination microscopy for nanoscale imaging of centimeter-scale tissues

Adam K. Glaser, Jayaram V. Chandrashekar, Sonya Vasquez, Cameron Arshadi, Rajvi Javeri, Naveen D. Ouellette, Xiaoyun Jiang, Judith Baka, Gábor Kovács, Micah Woodard, Shamishtaa Seshamani, Kevin Cao, Nathan G. Clack, Andrew K. Recknagel, Anna Grim, , Karel Svoboda

The paper introduces ExA-SPIM, a microscope that enables high-resolution imaging of large tissue samples without sectioning, demonstrating its use on mouse brains and human white matter.

eLife · Jun 30, 2025Peer-reviewedNeuroscience