Author

Jonghwan Shin

Theragen

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Biology Disciplines

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Cancer Biology· 1

Signature Assays, Organisms & Methods

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Approach:deep learning· 1 Organism:human· 1 Research Focus:variant calling· 1 Assay:whole-exome sequencing· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Ahwon LeeiD· 1 shared Dong-Hyuk HeoiD· 1 shared Eonji Noh· 1 shared Heeyeon Cho· 1 shared Inyoung Kim· 1 shared Jiin Park· 1 shared Jiwon Han· 1 shared Jongsung Lim· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperCancer Biology

Ahwon LeeORCID

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1 paper

Recent·Most cited

Accurate somatic variant detection from formalin fixed, paraffin embedded tissue (FFPE) derived WES and WGS by DeepOmicsFFPE-PLUS, a sequence context-based transformer

Wan Seop Kim, Ahwon Lee, Inyoung Kim, Seong-Eui Hong, Juyeong Park, Jongsung Lim, Eonji Noh, Minji Kim, Jiin Park, Jiwon Han, Misun Park, Heeyeon Cho, Jonghwan Shin, Yeongyu Yang, Soonmyung Paik, Dong-Hyuk Heo

This paper develops DeepOmicsFFPE-PLUS, a transformer-based tool to accurately detect somatic variants from FFPE-derived WES and WGS data, outperforming existing methods and restoring biologically relevant mutational signatures.

bioRxiv · Feb 7, 2026 · PreprintCancer Biology