Author

Junhyeong Kim

University of California, Berkeley

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3 Developmental Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Approach:experimental assay· 2 Research Focus:host-pathogen & immune response· 2 Assay:metagenomics· 2 Organism:plant (other)· 2 Approach:statistical model· 2 Organism:bacteria (other)· 1 Research Focus:chromatin & epigenetic regulation· 1

Frequent Co-Authors

Jillian F. BanfieldiD· 3 shared Ling-Dong ShiiD· 2 shared Rohan SachdevaiD· 2 shared Akira YamaokaiD· 1 shared Alexandra M. ShigenagaiD· 1 shared Artur Teixeira de AraújoiD· 1 shared Benjamin P. BoweniD· 1 shared Bethany Cristine KolodyiD· 1 shared

Activity by Year

2026-2026 · peak 4/yr

Co-Author Collaboration Network

10 top collaborators · 23 mutual co-author links

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Curved chords = mutual co-authorship

3 shared papersMicrobiology

Jillian F. BanfieldORCID

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Ductal myofibroblasts reactivate contractile program to stabilize alveolar architecture during lung regeneration

Hiroaki Katsura, Akira Yamaoka, Naozane Nomura, Junhyeong Kim, Osamu Nishimura, Doosen Cho, Mitsutaka Kadota, Takefumi Kondo, Takaya Abe, Hiroshi Kiyonari, Daisuke Hazama, Shinya Tane, Yoshimasa Maniwa, Tatsuya Nagano, Mitsuru Morimoto

The paper identifies ductal myofibroblasts as critical for maintaining alveolar structure during lung regeneration through reactivation of a contractile program.

bioRxiv · Sep 25, 2026 · PreprintDevelopmental Biology

Rice soil methane emissions are modulated by microbial cohorts that shape redox succession over the growing season

Bethany Cristine Kolody, Junhyeong Kim, Rohan Sachdeva, Ling-Dong Shi, Bruce A. Linquist, Jillian F. Banfield

This study identifies microbial cohorts in rice paddies that modulate methane emissions by shifting redox processes over the growing season.

bioRxiv · Aug 11, 2026 · PreprintMicrobiology

A Novel Pilus System in Candidate Phyla Radiation Bacteria

Luca A Troman, Junhyeong Kim, Jayson J A Rose, Matthew Johnson, Jillian F. Banfield, Steve Petrovski, Debnath Ghosal

This study identifies two novel pilins, PamA and PamB, from CPR bacteria using cryo-EM, revealing unique structural and assembly features distinct from known pilus systems.

bioRxiv · Jun 11, 2026 · PreprintMicrobiology

Reduced methane emissions in transgenic rice genotypes are associated with altered rhizosphere microbial hydrogen cycling

Ling-Dong Shi, María Florencia Ercoli, Junhyeong Kim, Artur Teixeira de Araújo, Katerina Estera‐Molina, Subah Soni, Tracy Satomi Weitz, Alexandra M. Shigenaga, Ilija Dukovski, Rohan Sachdeva, Halbay Turumtay, Katherine Louie, Benjamin P. Bowen, Suzanne M. Kosina, Henrik Vibe Scheller, , Jillian F. Banfield

This study shows that transgenic rice genotypes overexpressing PSY genes reduce methane emissions by altering rhizosphere microbial hydrogen cycling through changes in gene activity and metabolic pathways.

Nature Communications · Jan 26, 2026Peer-reviewedMicrobiology