Benchmark of data processing methods and machine learning models for gut microbiome-based diagnosis of inflammatory bowel disease
R. Kubinski, J.-Y. Djamen-Kepaou, T. Zhanabaev, A. Hernandez-Garcia, S. Bauer, F. Hildebrand, T. Korcsmaros, S. Karam, P. Jantchou, K. Kafi, R. D. Martin
This study benchmarks data processing methods and machine learning models for diagnosing IBD from gut microbiome data, finding that taxonomic features and non-linear models improve generalizability.
bioRxiv · May 3, 2021Microbiology