Author

Lawrence A David

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2 Microbiology· 1

Signature Assays, Organisms & Methods

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Assay:metagenomics· 3 Approach:statistical model· 3 Research Focus:benchmarking· 2 Organism:human· 2 Research Focus:cell-cell communication· 1 Research Focus:differential expression· 1 Research Focus:dimensionality reduction· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Sayan Mukherjee· 3 shared Justin D Silverman· 2 shared Alex D Washburne· 1 shared Alex Washburne· 1 shared Dominic J Bennett· 1 shared Eran HalperiniD· 1 shared John L Darcy· 1 shared Jonathan Leff· 1 shared

Activity by Year

2016-2018 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 23 mutual co-author links

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3 shared papersBioinformatics

Sayan Mukherjee

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3 papers

Recent·Most cited

Statistical Considerations in the Design and Analysis of Longitudinal Microbiome Studies

Justin D Silverman, Liat Shenhav, Eran Halperin, Sayan Mukherjee, Lawrence A David

This paper reviews statistical challenges in longitudinal microbiome studies and provides guidelines for design and analysis.

bioRxiv · Oct 20, 2018 · PreprintMicrobiology

Phylogenetic factorization of compositional data

Alex D Washburne, Justin D Silverman, Jonathan Leff, Dominic J Bennett, John L Darcy, Sayan Mukherjee, NOAH FIERER, Lawrence A David

The paper introduces phylofactorization, a method to identify phylogenetic factors driving microbial community composition patterns using compositional data from human and soil samples.

bioRxiv · Sep 12, 2016Bioinformatics

A phylogenetic transform enhances analysis of compositional microbiota data

Justin D Silverman, Alex Washburne, Sayan Mukherjee, Lawrence A David

The paper introduces the PhILR transform to improve analysis of microbiota data by incorporating phylogenetic information, enhancing statistical accuracy and revealing evolutionary patterns in microbial communities.

bioRxiv · Aug 31, 2016Bioinformatics