Author

Lili Li

Fudan University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Biology Disciplines

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Microbiology· 2

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Organism:human· 2 Assay:metagenomics· 2 Research Focus:clustering· 1 Approach:experimental assay· 1 Research Focus:host-pathogen & immune response· 1 Assay:imaging· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Huijue JiaiD· 2 shared Qiaoxing LiangiD· 2 shared Ruidong Guo· 2 shared Xihong LaniD· 2 shared Fei LiiD· 1 shared Guoping Zhao· 1 shared Guoping ZhaoiD· 1 shared Jiang WuiD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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2 shared papersMicrobiology

Huijue JiaORCID

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2 papers

Recent·Most cited

Precision culturomics enabled by unlabeled single-cell morphology and Raman spectra

Qiaoxing Liang, Xihong Lan, Jiayi Wu, Wei Wei, Lili Li, Xiaofang Tang, Guoping Zhao, Ruidong Guo, Huijue Jia

This paper introduces a precision culturomics method using single-cell morphology and Raman spectra to sort and analyze microbial cells, revealing antibiotic-driven resistance and mutations in gut commensals.

Nature Communications · Jun 20, 2026Peer-reviewedMicrobiology

Microbial single-cell omics in situ

Xihong Lan, Qiaoxing Liang, JINHUA HE, Jiang Wu, Xiaoying Zhang, Fei Li, Lili Li, Guoping Zhao, Ruidong Guo, Huijie Jia

The paper reports a method using LIFT technology to obtain high-quality microbial single-cell genomes or transcriptomes from complex samples and demonstrates its application to study cell-fate commitment in sporulation.

Cell Genomics · Jan 22, 2026Peer-reviewedMicrobiology