Author

Marie Harmel

University of Liège

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2 Genomics· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Research Focus:benchmarking· 2 Assay:metagenomics· 2 Organism:bacteria (other)· 1 Research Focus:database / resource· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Luc CornetiD· 3 shared Benoit DurieuiD· 2 shared Alexandre Bartholomaus· 1 shared Annick WilmotteiD· 1 shared Antonis ChatzinotasiD· 1 shared Belén GuijarroiD· 1 shared Bjorn TytgatiD· 1 shared Costas C. PapagiannitsisiD· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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3 shared papersBioinformatics

Luc CornetORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

A new automated pipeline for whole genome shotgun sequencing analysis and hazard characterization of microbial pesticides

J. Saraiva, Valérian Lupo, Francisco Cerqueira, Stavroula Makri, Sotirios Vasileiadis, Belén Guijarro, Alexandre Bartholomaus, Costas C. Papagiannitsis, Marie Harmel, Staphan Declerck, Luc Cornet, Antonis Chatzinotas, Dimitrios Georgios Karpouzas, Gunter Brader

The paper introduces an automated pipeline for whole-genome sequencing analysis of microbial pesticides to improve hazard characterization and risk assessment.

bioRxiv · Jul 24, 2026 · PreprintBioinformatics

Taxonomic Description of Uncultured Cyanobacteria from Extreme Habitats through Genome-Based Classification

Edi Sudianto, Maximillian D. Shlafstein, Benoit Durieu, Marie Harmel, Luc Cornet, Jimmy H. W. Saw

The paper describes eight new cyanobacterial species and one new genus from Hawaiian steam vents using genome-based classification and phylogenomic analysis.

bioRxiv · Jan 2, 2026 · PreprintGenomics

A FAIR Amplicon Sequencing Workflow for Long-term Environmental Monitoring

Marie Harmel, Benoit Durieu, Valentina Savaglia, Bjorn Tytgat, Denis Baurain, Annick Wilmotte, Elie Verleyen, Luc Cornet

The paper develops a FAIR amplicon sequencing workflow for long-term environmental monitoring of microbial communities in Antarctica.

bioRxiv · Dec 8, 2025 · PreprintBioinformatics