Author

Nicole Cernela

University of Zurich

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 2

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Research Focus:benchmarking· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Jule Anna HorlbogiD· 2 shared Michael BiggeliD· 2 shared Roger StephaniD· 2 shared Heather A. CarletoniD· 1 shared Jessica CheniD· 1 shared Lara UrbaniD· 1 shared Michael B. HalliD· 1 shared Michael S. DeMottiD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersGenomics

Jule Anna HorlbogORCID

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2 papers

Recent·Most cited

Standalone nanopore sequencing for foodborne pathogen surveillance: a large-scale evaluation and quality control framework

Michael Biggel, Nicole Cernela, Jule Anna Horlbog, Michael S. DeMott, Peter C. Dedon, Michael B. Hall, Jessica Chen, P. B. Smith, Heather A. Carleton, Roger Stephan, Lara Urban

This paper evaluates standalone Oxford Nanopore sequencing for foodborne pathogen surveillance, showing it can achieve high accuracy with quality control tools like alpaqa.

bioRxiv · Jul 6, 2026 · PreprintGenomics

Oxford Nanopore's 2024 sequencing technology for Listeria monocytogenes outbreak detection and source attribution: progress and clone-specific challenges

Michael Biggel, Nicole Cernela, Jule Anna Horlbog, Roger Stephan

This study evaluates Oxford Nanopore Technologies for Listeria monocytogenes outbreak detection, finding most assemblies suitable for high-resolution genotyping but with challenges from methylation motifs.

Journal of Clinical Microbiology · Oct 4, 2024Peer-reviewedGenomics