Author

Nils McCarthy

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Approach:experimental assay· 1 Organism:human· 1 Approach:statistical model· 1 Research Focus:variant calling· 1 Research Focus:variant effect prediction· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Adam C. EnglishiD· 1 shared Alindrina Mangubat· 1 shared Lisa Meed· 1 shared Robert Flickenger· 1 shared Sri Niranjan Shekar· 1 shared Surabhi MaheshwariiD· 1 shared

Activity by Year

2020-2020 · peak 1/yr

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6 top collaborators · 15 mutual co-author links

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1 shared paperBioinformatics

Adam C. EnglishORCID

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1 paper

Recent·Most cited

Leveraging a WGS compression and indexing format with dynamic graph references to call structural variants.

Adam C. English, Nils McCarthy, Robert Flickenger, Surabhi Maheshwari, Lisa Meed, Alindrina Mangubat, Sri Niranjan Shekar

The paper introduces a structural variant calling pipeline called BioGraph, which achieves higher sensitivity for detecting SVs compared to existing pipelines, though with lower precision.

bioRxiv · Apr 24, 2020 · PreprintBioinformatics