scPipe: An extended preprocessing pipeline for comprehensive single-cell ATAC-Seq data integration in R/Bioconductor
Shanika L. Amarasinghe, Phil Yang, Oliver Voogd, Haoyu Yang, Mei R. M. Du, Shian Su, Daniel V. Brown, Jafar S. Jabbari, Rory J. Bowden, Matthew E. Ritchie
scPipe provides a preprocessing pipeline for single-cell ATAC-Seq and multi-modal data in R/Bioconductor, enabling quality control and downstream analysis.
NAR Genomics and Bioinformatics · Oct 11, 2023Peer-reviewedBioinformatics