Author

R. Poudel

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Ecology· 2 Microbiology· 2

Signature Assays, Organisms & Methods

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Assay:metagenomics· 3 Approach:statistical model· 3 Research Focus:ecology & biodiversity· 2 Organism:plant (other)· 2 Organism:bacteria (other)· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Approach:deep learning· 1

Frequent Co-Authors

C. Rivard· 2 shared L. Gomez-Montano· 2 shared M. Kennelly· 2 shared A. Ellington· 1 shared A. Jumpponen· 1 shared A. M. Jumpponen· 1 shared A. R. Rivers· 1 shared C. Cando Dumancela· 1 shared

Activity by Year

2018-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 13 mutual co-author links

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2 shared papersEcology

C. Rivard

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

An Arrayed Transposon Library of Ruegeria pomeroyi DSS-3

C. Mejia, L. Trujillo Rodriguez, R. Poudel, A. Ellington, A. R. Rivers, C. Reisch

The paper develops a hierarchical barcoding workflow to construct an arrayed transposon mutant library of Ruegeria pomeroyi DSS-3, generating over 2,800 disrupted genes.

bioRxiv · Sep 11, 2022 · PreprintMicrobiology

Exposure to Airborne Bacteria Depends upon Vertical Stratification and Vegetation Complexity

J. M. Robinson, C. Cando Dumancela, R. E. Antwis, R. Cameron, C. Liddicoat, R. Poudel, P. Weinstein, M. F. Breed

This study investigates aerobiome vertical stratification and diversity in different green spaces, finding that habitat type and vegetation complexity influence bacterial diversity and exposure potential.

bioRxiv · Nov 11, 2020Ecology

Integration of system phenotypes in microbiome networks to identify candidate synthetic communities: a study of the grafted tomato rhizobiome

R. Poudel, A. Jumpponen, M. Kennelly, C. Rivard, L. Gomez-Montano, K. A. Garrett

The paper identifies candidate fungal OTUs linked to tomato yield using a phenotype-OTU network analysis (PhONA) in grafted tomato rootstocks.

bioRxiv · Dec 12, 2019Ecology

Rootstocks shape the rhizobiome: Rhizosphere and endosphere bacterial communities in the grafted tomato system

R. Poudel, A. M. Jumpponen, M. Kennelly, C. Rivard, L. Gomez-Montano, K. Garrett

This study examines how rootstock genotypes and grafting affect bacterial diversity and composition in the endosphere and rhizosphere of grafted tomato plants using 16S rRNA sequencing.

bioRxiv · Jul 24, 2018Microbiology