GAPiM: Discovering Genetic Variations on a Real Processing-in-Memory System
Naomie Abecassis, Juan Gómez-Luna, Onur Mutlu, Ran Ginosar, Aphélie Moisson-Franckhauser, Leonid Yavits
The paper implements and evaluates a modified Pair-HMM algorithm on a PiM platform for faster variant calling in genome analysis.
bioRxiv · Jul 26, 2023 · PreprintBioinformatics