Author

Renyuan Ma

Bowdoin College

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 3

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Assay:bulk RNA-seq· 2 Organism:human· 2 Research Focus:benchmarking· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Approach:machine learning (classical)· 1 Organism:plant (other)· 1

Frequent Co-Authors

Han QuiD· 3 shared Jianguo ZhuiD· 3 shared Jianming LüiD· 3 shared Julong Wei· 3 shared Le ZhangiD· 3 shared Ruidong LiiD· 3 shared Shibo WangiD· 3 shared Weide ZhongiD· 3 shared

Activity by Year

2018-2020 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersBioinformatics

Han QuORCID

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Author profile →

3 papers

Recent·Most cited

Extended Application of Genomic Selection to Screen Multi-Omics Data for Prognostic Signatures of Prostate Cancer

Ruidong Li, Shibo Wang, Yanru Cui, Han Qu, John M. Chater, Le Zhang, Julong Wei, Meiyue Wang, YANG CANG XU, Lei Ming Yu, Jianming Lü, Yuanfa Feng, Rui Zhou, Yuhan Huang, Renyuan Ma, , Zhenyu Jia

The paper applies genomic selection methods to multi-omics data to develop prognostic signatures for prostate cancer, showing improved predictability and computational efficiency.

Briefings in Bioinformatics · Aug 3, 2020Peer-reviewedBioinformatics

Inference of Chromosome-length Haplotypes Using Genomic Data of Three to Five Single Gametes

Ruidong Li, Han Qu, Jinfeng Chen, Shibo Wang, John M. Chater, Le Zhang, Julong Wei, Yuan‐Ming Zhang, Chenwu Xu, Weide Zhong, Jianguo Zhu, Jianming Lü, Yuanfa Feng, Weiming Chen, Renyuan Ma, , Zhenyu Jia

Hapi infers chromosome-length haplotypes from 3-5 gametes, outperforming existing methods in accuracy, reliability, and cost efficiency.

Molecular Biology and Evolution · Jul 9, 2020Peer-reviewedBioinformatics

GDCRNATools: an R/Bioconductor package for integrative analysis of lncRNA, miRNA, and mRNA data in GDC

Ruidong Li, Han Qu, Shibo Wang, Julong Wei, Le Zhang, Renyuan Ma, Jianming Lü, Jianguo Zhu, Weide Zhong, Zhenyu Jia

GDCRNATools provides an R/Bioconductor package for analyzing lncRNA, miRNA, and mRNA data from the GDC to study ceRNA regulatory networks in cancers.

Bioinformatics · Feb 28, 2018Peer-reviewedBioinformatics