Author

Roger Kramer

Institute for Systems Biology

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:CITE-seq· 1 Research Focus:database / resource· 1 Research Focus:dimensionality reduction· 1 Research Focus:gene regulatory network inference· 1 Assay:scRNA-seq· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Andrew Bauman· 1 shared Anushya MuruganujaniD· 1 shared Arthur W. TogaiD· 1 shared Ben HeavneriD· 1 shared Carl KesselmaniD· 1 shared David S CampbelliD· 1 shared Eric W. DeutschiD· 1 shared Farshid SepehrbandiD· 1 shared

Activity by Year

2018-2019 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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1 shared paperBioinformatics

Andrew Bauman

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2 papers

Recent·Most cited

SISUA: SemI-SUpervised generative Autoencoder for single cell data

Trung Ngô Trọng, Roger Kramer, Juha Mehtonen, Gerardo González, Ville Hautamäki, Merja Heinäniemi

The paper introduces a semi-supervised generative model for single-cell data using CITE-seq protein counts to improve gene expression analysis.

bioRxiv · May 8, 2019 · PreprintBioinformatics

BDQC: a general-purpose analytics tool for domain-blind validation of Big Data

Eric W. Deutsch, Roger Kramer, Joseph Ames, Andrew Bauman, David S Campbell, Kyle Chard, Kristi A. Clark, Mike D’Arcy, Ivo D. Dinov, Rory Donovan-Maiye, Ian T Foster, Ben Heavner, Leroy Hood, Carl Kesselman, Ravi Madduri, , Gustavo Glusman

BDQC identifies data outliers and anomalies in large-scale genomic pipelines without domain knowledge, improving data quality and enabling new insights.

bioRxiv · Feb 2, 2018 · PreprintBioinformatics