Harmonization of whole genome sequencing for outbreak surveillance of Enterobacteriaceae and Enterococci
C. Jamin, S. de Koster, S. van Koeveringe, D. de Coninck, K. Mensaert, K. de Bruyne, N. Perales Selva, C. Lammens, H. Goossens, C. J. Hoebe, P. Savelkoul, L. B. van Alphen
This study demonstrates that harmonized whole genome sequencing across multiple centers is achievable for bacterial outbreak surveillance, achieving high precision and accuracy in genotyping and MLST analysis.
bioRxiv · Nov 20, 2020Microbiology