Author

Samuel Fosse

École Normale Supérieure de Rennes

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Bioinformatics· 2

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:benchmarking· 2 Approach:statistical model· 2 Organism:bacteria (other)· 1 Approach:Bayesian inference· 1 Approach:benchmark study· 1 Assay:DNA methylation· 1 Research Focus:phylogenetics / evolution· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Sebastián DuchêneiD· 2 shared Camila Duitama GonzáleziD· 1 shared Mario dos ReisiD· 1 shared Simona IvanoviD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

4 top collaborators · 4 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBioinformatics

Sebastián DuchêneORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

The limits of Bayesian estimates of divergence times in measurably evolving populations

Simona Ivanov, Samuel Fosse, Mario dos Reis, Sebastián Duchêne

This paper examines the limits of Bayesian divergence time estimates in microbial evolution, finding that uncertainty scales with distance to calibration points rather than absolute age.

bioRxiv · Oct 4, 2026 · PreprintBioinformatics

Benchmarking BEAGLE to find optimal parameters for BEAST X

Samuel Fosse, Sebastián Duchêne, Camila Duitama González

The paper benchmarks BEAGLE integration in BEAST X to determine optimal parameters for different hardware configurations using Dengue Virus data and simulations.

bioRxiv · Mar 12, 2026 · PreprintBioinformatics