scDEcrypter: Uncertainty-aware differential expression analysis for viral infection in scRNA-seq
Luer Zhong, Karl J. Ensberg, Scott Tibbets, Aaron J. Molstad, Rhonda L. Bacher
scDEcrypter improves differential expression analysis in viral infection studies by accounting for uncertainty in cell-state and infection labels, identifying more biologically relevant genes and pathways.
bioRxiv · Oct 3, 2026 · PreprintGenomics