Author

Shaohui Shi

Second Affiliated Hospital of Zhejiang University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 1 Organism:human· 1 Assay:Ribo-seq· 1 Approach:transformer / foundation model· 1 Research Focus:variant effect prediction· 1

Frequent Co-Authors

Carles A. BoixiD· 1 shared Chengyu LiiD· 1 shared Jialin HeiD· 1 shared Jingyun LiiD· 1 shared Jiuhong NaniD· 1 shared Ke DingiD· 1 shared Kexuan CheniD· 1 shared Lei XiongiD· 1 shared

Activity by Year

2024-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperGenomics

Carles A. BoixORCID

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1 paper

Recent·Most cited

Deep learning modeling of ribosome profiling reveals regulatory underpinnings of translatome and interprets disease variants

Jialin He, Lei Xiong, Shaohui Shi, Chengyu Li, Kexuan Chen, Qianchen Fang, Jiuhong Nan, Ke Ding, Jingyun Li, Yuanhui Mao, Carles A. Boix, Xinyang Hu, M Kellis, Xushen Xiong

The paper introduces Translatomer, a transformer model that predicts cell-type-specific translation from mRNA and sequence data, identifies disease variants affecting translation, and reveals non-eQTL regulatory mechanisms.

bioRxiv · Feb 26, 2024 · PreprintGenomics