Author

Simin Li

Ministry of Ecology and Environment

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Cell Biology· 1 Ecology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Approach:experimental assay· 2 Research Focus:spatial domain detection· 2 Research Focus:benchmarking· 1 Assay:ChIP-seq· 1 Research Focus:clustering· 1 Assay:DNA methylation· 1 Assay:fluorescence / live-cell microscopy· 1

Frequent Co-Authors

Ajuan ZhangiD· 1 shared Andreas Kauk· 1 shared Andrey G. ZueviD· 1 shared Anton PotapoviD· 1 shared Bingxue Zhu· 1 shared Birgit BalkenholiD· 1 shared Clement Schneider· 1 shared Cornelia Wiesener· 1 shared

Activity by Year

2018-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperEcology

Ajuan ZhangORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Soil invertebrate biomass estimation from image-derived body area and contour length

Ajuan Zhang, Jing‐Zhong Lu, Andrey G. Zuev, Bingxue Zhu, Nicole Scheunemann, Cornelia Wiesener, Andreas Kauk, Birgit Balkenhol, Julia Noe, Sebastian Moll, Simin Li, Anton Potapov, Clement Schneider

This paper develops a framework to estimate soil invertebrate biomass using image-derived body area and contour length, showing good predictive performance across taxa and community scales.

bioRxiv · Oct 9, 2026 · PreprintEcology

Flat-field superresolution structured illumination microscopy with joint temporal-spatial light modulation

Yong Liang, Gang Wen, Jie Zhang, Simin Li, Yao Tan, Xin Jin, Linbo Wang, Xiaohu Chen, Jing Gao, Hui Li

This paper introduces a flat-field structured illumination microscopy method to improve field uniformity and enable large-scale imaging of whole cells and pathological samples.

bioRxiv · May 1, 2024 · PreprintCell Biology

RNAs as proximity labeling media for identifying nuclear speckle positions relative to the genome

Weizhong Chen, Zhangming Yan, Simin Li, Norman Huang, Xuerui Huang, Jin Zhang, Sheng Zhong

The paper identifies genomic regions proximal to nuclear speckles using noncoding RNAs and MARGI assay, showing nsaRNAs interact with specific genomic sites.

iScience · Jun 1, 2018Peer-reviewedBioinformatics