A Domain-Specific Language Model Approach for Identifying Immunogenic Epitopes from Publicly Available Data: EpitopeMiner
Wei Kit Tan, Wei Tang, Agamjyot Singh Chadha, Roopa Niedu, Wendy Lee, Jing Quan Lim, Menaka Priyadharsani Rajapakse, Solomon Wilson, Kaibo Duan, Raymand Wei Liang Chong, Choon Kiat Ong, Bernett Teck Kwong Lee, Olaf Rötzschke, Mai Chan Lau
EpitopeMiner identifies immunogenic epitopes using a domain-specific LLM with RAG, improving retrieval of relevant literature and supporting neoantigen validation.
bioRxiv · Jan 21, 2025 · PreprintCancer Biology