Divide-and-conquer quantum algorithm for hybrid de novo genome assembly of short and long reads
Jing-Kai Fang, Yuefeng Lin, Jun-Han Huang, Yibo Chen, Gao-Ming Fan, Yuhui Sun, Guanru Feng, Cong Guo, Tiejun Meng, Yong Zhang, Xun Xu, Jingen Xiang, Yuxiang Li
This paper proposes a hybrid quantum algorithm for genome assembly using short and long reads to address repetitive sequences and sequencing errors, showing improved convergence and optimization.
bioRxiv · Sep 19, 2023 · PreprintBioinformatics