Author

Yi Yu

Illinois Institute of Technology

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Biology Disciplines

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Bioengineering· 1 Bioinformatics· 1 Genetics· 1

Signature Assays, Organisms & Methods

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Organism:human· 2 Approach:Bayesian inference· 1 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Assay:electrophysiology· 1 Research Focus:gene regulatory network inference· 1 Research Focus:GWAS / association mapping· 1 Assay:GWAS summary statistics· 1

Frequent Co-Authors

Can CheniD· 1 shared Chen LiaoiD· 1 shared Dongze YeiD· 1 shared Eric H. Souied· 1 shared Erin K. Wagner· 1 shared Ilkka J. Immonen· 1 shared James M. FinleyiD· 1 shared Jiawen DuiD· 1 shared

Activity by Year

2016-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 13 mutual co-author links

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1 shared paperBioinformatics

Can ChenORCID

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Author profile →

3 papers

Recent·Most cited

Estimating Muscle Parameters via Hierarchical Bayesian Inference

Russell T. Johnson, Yi Yu, Yannick Darmon, Victor R. Barradas, Dongze Ye, Nicolas Schweighofer, James M. Finley

This paper introduces a hierarchical Bayesian framework to estimate subject-specific muscle parameters using EMG and torque data, achieving high accuracy and robustness in musculoskeletal modeling.

bioRxiv · Jul 9, 2026 · PreprintBioengineering

MuSHIN: A multi-way SMILES-based hypergraph inference network for metabolic model reconstruction

Yanlong Zhao, Yixiao Chen, Yi Yu, Xiang Liu, Jiawen Du, Jun Wen, Chen Liao, Quan Sun, Ren Wang, Can Chen

MuSHIN improves genome-scale metabolic models by predicting missing reactions using a deep hypergraph learning method, enhancing their predictive accuracy and phenotypic predictions.

Communications Biology · Mar 5, 2026Peer-reviewedBioinformatics

Novel protective associations with age-related macular degeneration: A common variant near CTRB1 and a rare variant in PELI3

Erin K. Wagner, Yi Yu, Eric H. Souied, Sanna Seitsonen, Ilkka J. Immonen, Paavo Häppölä, Soumya Raychaudhuri, Mark J. Daly, Johanna M. Seddon

This study identifies new protective variants for age-related macular degeneration, including a common variant near CTRB1 and rare variants in PELI3 and CFH.

bioRxiv · Apr 9, 2016 · PreprintGenetics