Author

Ying Qi

Goethe University Frankfurt

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Molecular Biology· 3 Biochemistry· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Organism:human· 3 Research Focus:benchmarking· 2 Assay:metagenomics· 2 Assay:proteomics· 2 Approach:statistical model· 2 Approach:benchmark study· 1 Research Focus:cell type annotation· 1

Frequent Co-Authors

Stefanie KaiseriD· 4 shared Leona A. RuslingiD· 3 shared Jannick Schicktanz· 2 shared Kira Kerkhoff· 2 shared Nur Yeşiltaç-TosuniD· 2 shared Sam Wein· 2 shared Sofia Obersteiner· 2 shared Antony LechneriD· 1 shared

Activity by Year

2018-2026 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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4 shared papersMolecular Biology

Stefanie KaiserORCID

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

Human 28S rRNA analysed by state-of-the-art oligonucleotide mass spectrometry: benchmarking current capabilities and a call to action for MS-Seq

Jannick Schicktanz, Ying Qi, Junzhou Wu, Bibek Hamal, Antony Lechner, Sam Wein, Oskar Knittelfelder, Nur Yeşiltaç-Tosun, Jan Felix Dalwigk, Katharina Hoja, Leona A. Rusling, Sofia Obersteiner, Ella Bellenberg, Kira Kerkhoff, Michael S. DeMott, , Stefanie Kaiser

The paper benchmarks MS-Seq for human 28S rRNA analysis, showing reproducible results across platforms but highlighting gaps in coverage and ambiguity.

bioRxiv · Jul 17, 2026 · PreprintMolecular Biology

Long-term stability of RNA nucleoside standards for accurate LC-MS quantification

Kira Kerkhoff, Hagen Wesseling, Ying Qi, Sofia Obersteiner, Kuangjie Liu, Maximilian Berg, Leona A. Rusling, Hendrik Zipse, Stefanie Kaiser

This study evaluates the long-term stability of RNA nucleoside standards under different storage conditions and proposes guidelines for their preparation and quality control.

Nucleic Acids Research · Apr 24, 2026Peer-reviewedMolecular Biology

ALKBH1 activity in vitro and human cell lines by isotope dilution mass spectrometry

Bennett Henzeler, Olga Hofmeister, Ken Kögel, Ying Qi, Felix Hagelskamp, Matthias Heiß, Florian Schelter, Felix Xu, Lena Josefine Daumann, Thomas Carell, Stefanie Kaiser, Sabine Schneider

This study assesses ALKBH1 activity in vitro and in human cell lines using mass spectrometry, finding no significant impact on tRNA modifications under optimal conditions.

PLoS ONE · Apr 6, 2026Peer-reviewedBiochemistry

Ion-Pair-Free Nanoflow HILIC-MS With RNase Benchmarking for Native RNA

Ying Qi, Chengkang Li, Nur Yeşiltaç-Tosun, Jannick Schicktanz, Leona A. Rusling, Steffen Kaiser, Sam Wein, Stefanie Kaiser

The paper introduces a sensitive oligonucleotide-MS workflow for analyzing native RNA modifications and benchmarks three nucleases for their ability to cleave modified RNAs.

bioRxiv · Nov 18, 2025 · PreprintMolecular Biology

Human cytomegalovirus RNA2.7 regulates host cell cycle and facilitates viral DNA replication by inhibiting RNA polymerase II phosphorylation

Yujing Huang, Jing Zhang, Xin Guo, Qing Wang, Zhongyang Liu, Yanping Ma, Ying Qi, Qiang Ruan

This study identifies RNA2.7 as a viral long non-coding RNA that inhibits host cell cycle progression and promotes viral DNA replication by blocking RNA polymerase II phosphorylation.

bioRxiv · Jul 26, 2018 · PreprintMicrobiology