Author

Yu Luo

Sun Yat-sen University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Same name, identified by ORCID

Biology Disciplines

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Bioinformatics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 1 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Assay:ChIP-seq· 1 Research Focus:database / resource· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1

Frequent Co-Authors

Ashish A. MalikiD· 1 shared Fang LiiD· 1 shared H. LiiD· 1 shared Hao LiiD· 1 shared Jennifer B. H. MartinyiD· 1 shared Jingxi QiniD· 1 shared Josep RamonedaiD· 1 shared Katherine L. ShekiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperMicrobiology

Ashish A. MalikORCID

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2 papers

Recent·Most cited

A life-history axis of resource acquisition in bacteria: depolymerisation versus uptake

Yingyi Fu, Luciana Chávez Rodríguez, Josep Ramoneda, Katherine L. Shek, Jennifer B. H. Martiny, Steven Allison, Yu Luo, Ashish A. Malik

The paper develops a genomic ratio to quantify resource-acquisition strategies in bacteria, finding uptake-optimised bacteria dominate early decomposition and depolymerisation-optimised bacteria dominate later stages.

bioRxiv · Oct 26, 2026 · PreprintMicrobiology

PPARgene 2.0: leveraging large language models and multi-omics data for enhanced identification and prediction of PPAR target genes

Jingxi Qin, Weili Xie, H. Li, Hao Li, Yucheng Zeng, Yu Luo, Yankai Li, Taining Sha, Nanping Wang, Yanhui Li, Fang Li

PPARgene 2.0 updates the database with new PPAR target genes and improves prediction using language models and ChIP-seq data.

bioRxiv · Dec 4, 2025 · PreprintBioinformatics