Danilo Augusto Sforça

Multi-omics integration reveals candidate genes and molecular mechanisms associated with resistance to sugarcane smut

The paper integrates association mapping and transcriptomics to identify candidate genes and molecular mechanisms associated with sugarcane resistance to smut.

Sugarcane yellow leaf virus impairs the transcriptomic defense responses of sugarcane to its new aphid vector Melanaphis sorghi

This study investigates how Sugarcane yellow leaf virus (SCYLV) affects sugarcane's transcriptomic defense responses to its aphid vector Melanaphis sorghi, identifying key gene pathways and regulatory hubs.

Genetic response to light and carbon source variations in Trichoderma harzianum: The key regulatory roles of env1, cre1, and blr2

This study investigates how light and carbon sources affect gene expression in Trichoderma harzianum, identifying env1, cre1, and blr2 as key regulators of metabolic adaptation.

Identifying Candidate Genes for Sugar Accumulation in Sugarcane Cultivars: From a Syntenic Genomic Region to a Gene Coexpression Network

The paper identifies three candidate genes for sugar accumulation in sugarcane using synteny analysis, BAC library screening, RNA-seq, and coexpression network analysis.

Targeting lignocellulolytic gene clusters in novel Trichoderma atroviride and Trichoderma harzianum strains through Bac-guided analysis

The paper identifies novel lignocellulolytic gene clusters in Trichoderma species by analyzing genomic regions enriched in degradative enzymes using BAC methodology and RNA-seq data.

Whole-Genome Sequencing and Comparative Genomic Analysis of Potential Biotechnological Strains of Trichoderma harzianum, Trichoderma atroviride, and Trichoderma reesei

The paper performs whole-genome sequencing and comparative genomic analysis of Trichoderma strains to assess genetic diversity and identify structural variants.

Temporal Gene Expression in Apical Culms Shows Early Changes in Cell Wall Biosynthesis Genes in Sugarcane

The paper identifies differentially expressed genes related to sucrose metabolism and cell wall biosynthesis in sugarcane apical culms across developmental stages and genotypes.

The sugarcane and sorghum kinomes: insights into evolutionary expansion and diversification

This study profiles the kinomes of sugarcane and sorghum, identifying PKs and their evolutionary relationships, and provides expression patterns and coexpression networks.

Integrative Genomic Analysis for the Bioprospection of Regulators and Accessory Enzymes Associated with Cellulose Degradation in a Filamentous Fungus (Trichoderma harzianum)

The paper identifies CAZymes, transcription factors, and transporters in Trichoderma harzianum IOC3844 involved in cellulose degradation using genomic, transcriptomic, and exoproteomic data.