bioRxivCancer Biology
Prostate-derived circulating microRNAs add prognostic value to prostate cancer risk calculators
M. L. Zenner, B. Kirkpatrick, T. R. Leonardo, M. J. Schlicht, A. C. Saldana, C. Loitz, K. Valyi-Nagy, M. Maienschein-Cline, P. H. Gann, M. Abern, L. Nonn
Abstract
Prostate cancer is the second leading cause of malignancy-related deaths among American men. Active surveillance is a safe option for many men with less aggressive disease, yet definitively determining low-risk cancer is challenging with biopsy alone. Herein, we sought to identify prostate-derived microRNAs in patient sera and serum extracellular vesicles, and determine if those microRNAs improve upon the current clinical risk calculators for prostate cancer prognosis before and after biopsy. Prostate-derived intracellular and extracellular vesicle-contained microRNAs were identified by small RNA sequencing of prostate cancer patient explants and primary cells. Abundant microRNAs were included in a custom microRNA PCR panel that was queried in whole serum and serum extracellular vesicles from a diverse cohort of men diagnosed with prostate cancer. The levels of these circulating microRNAs significantly differed between indolent and aggressive disease and improved the area under the curve for pretreatment nomograms of prostate cancer disease risk. The microRNAs within the extracellular vesicles had improved prognostic value compared to the microRNAs in the whole serum. In summary, quantifying microRNAs circulating in extracellular vesicles is a clinically feasible assay that may provide additional information for assessing prostate cancer risk stratification.
- organism: human
- assay: bulk RNA-seq
- research focus: differential expression
- research focus: protein structure prediction
- approach: statistical model
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