Author

A. Javidi

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biophysics· 2

Signature Assays, Organisms & Methods

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Approach:mechanistic / dynamical model· 2 Research Focus:protein folding & dynamics· 2 Assay:protein structure· 2

Frequent Co-Authors

G. Stan· 2 shared H. Y. Y. Fonseka· 2 shared C. M. Gonzales· 1 shared C. Micheletti· 1 shared J. L. Nugent· 1 shared L. F. L. Oliveira· 1 shared M. Damre· 1 shared M. S. Kelly· 1 shared

Activity by Year

2021-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersBiophysics

G. Stan

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2 papers

Recent·Most cited

Exploring the effect of mechanical anisotropy of protein structures in the unfoldase mechanism of AAA+ molecular machines

R. A. Varikoti, H. Y. Y. Fonseka, M. S. Kelly, A. Javidi, M. Damre, S. Mullen, J. L. Nugent, C. M. Gonzales, G. Stan, R. I. Dima

This study investigates how mechanical anisotropy in protein structures influences the unfolding mechanisms of AAA+ molecular machines like spastin and ClpY.

bioRxiv · Apr 6, 2022Biophysics

Unfolding and Translocation of Knotted Proteins by Clp Biological Nanomachines: Synergistic Contribution of Primary Sequence and Topology Revealed by Molecular Dynamics Simulations

H. Y. Y. Fonseka, A. Javidi, L. F. L. Oliveira, C. Micheletti, G. Stan

The paper uses molecular dynamics simulations to study how knotted proteins are unfolded by ClpY ATPase, showing that primary sequence and topology both influence translocation.

bioRxiv · Apr 30, 2021Biophysics