Author

Amanda Su

Massachusetts Institute of Technology

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Approach:experimental assay· 2 Organism:human· 2 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Gene Wei-Ming YeoiD· 2 shared Shashank SatheiD· 2 shared Ashley L. Louie· 1 shared Balaji SundararamaniD· 1 shared Bing ZhouiD· 1 shared Brenton R. GraveleyiD· 1 shared Brian A. YeeiD· 1 shared Cassandra A BazileiD· 1 shared

Activity by Year

2020-2020 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 38 mutual co-author links

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2 shared papersMolecular Biology

Gene Wei-Ming YeoORCID

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2 papers

Recent·Most cited

Pseudouridine synthases modify human pre-mRNA co-transcriptionally and affect splicing

Nicole M. Martínez, Amanda Su, Julia K. Nussbacher, Margaret C. Burns, Cassandra Schaening-Burgos, Shashank Sathe, Gene Wei-Ming Yeo, Wendy V. Gilbert

This study shows that pseudouridine is added co-transcriptionally to pre-mRNA and affects alternative splicing by modifying RNA structure and interactions.

bioRxiv · Aug 29, 2020 · PreprintMolecular Biology

A Large-Scale Binding and Functional Map of Human RNA Binding Proteins

Eric L. Van Nostrand, Peter Freese, Henry Pratt, Xiaofeng Wang, Xintao Wei, Rui Xiao, Steven M. Blue, Jiayu Chen, Neal A. L. Cody, Daniel Dominguez, Sara Olson, Balaji Sundararaman, Lijun Zhan, Cassandra A Bazile, Louis Philip Benoit Bouvrette, , Gene Wei-Ming Yeo

The paper maps and characterizes RNA elements recognized by human RNA binding proteins in K562 and HepG2 cells, expanding the catalog of functional elements in the human genome.

Nature · Jul 29, 2020Peer-reviewedGenomics