Author

Andrew Koh

University of California, San Francisco

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 2 Bioinformatics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Organism:human· 4 Research Focus:cancer & tumor microenvironment· 2 Approach:experimental assay· 2 Assay:scATAC-seq· 2 Assay:scRNA-seq· 2 Approach:statistical model· 2 Research Focus:batch correction / integration· 1 Research Focus:benchmarking· 1

Frequent Co-Authors

Catherine Choy SmithiD· 3 shared Cheryl A.C. PeretziD· 3 shared Elaine TraniD· 3 shared Adam B. OlsheniD· 2 shared Bogdan Ovidiu PopescuiD· 2 shared Matthew F. Jones· 2 shared Natália Faraj MuradiD· 2 shared Ritu RoyiD· 2 shared

Activity by Year

2025-2026 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 42 mutual co-author links

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3 shared papersCancer Biology

Catherine Choy SmithORCID

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Author profile →

4 papers

Recent·Most cited

A Urinary Metabolomic Signature Associated with Small Intestinal Bacterial Overgrowth in Children with Short Bowel Syndrome

Wenjing Zong, Shuheng Gan, Christina Zarek, Miao He, Reena Alame, Elicenda Tovar, Sandra Yang, Samuel Huo, Lindsey Albenberg, Xiaowei Zhan, Gary D Wu, Christina Bales, Andrew Koh

The paper identifies a urinary metabolomic signature linked to small intestinal bacterial overgrowth in children with short bowel syndrome using gas chromatography/mass spectrometry.

bioRxiv · Nov 5, 2026 · PreprintMicrobiology

Multi-selective RAS(ON) Inhibition Targets Oncogenic RAS Mutations and Overcomes RAS/MAPK-Mediated Resistance to FLT3 and BCL2 Inhibitors in Acute Myeloid Leukemia

Bogdan Popescu, Matthew F. Jones, Madison Piao, Elaine Tran, Andrew Koh, Isabelle Lomeli, Cheryl A.C. Peretz, Natália Faraj Murad, Sydney Abelson, Carolina Morales, José M. Rivera, Yana Pikman, Michael L. Cheng, Aaron C. Logan, Elliot Stieglitz, Catherine Choy Smith

This study evaluates RMC-7977, a RAS(ON) inhibitor, showing efficacy against RAS-driven resistance in AML and potential for combination therapies.

bioRxiv · Jun 10, 2025 · PreprintCancer Biology

Single Nucleotide Polymorphism (SNP) and Antibody-based Cell Sorting (SNACS): A tool for demultiplexing single-cell DNA sequencing data

Vanessa Elaine Kennedy, Ritu Roy, Cheryl A.C. Peretz, Andrew Koh, Elaine Tran, Catherine Choy Smith, Adam B. Olshen

The paper introduces SNACS, a method for demultiplexing single-cell DNA sequencing data using SNPs and cell-surface antibodies, achieving higher accuracy than existing methods.

Bioinformatics · Jun 1, 2025Peer-reviewedBioinformatics

RAS pathway activation drives clonal selection and monocytic differentiation in FLT3 and BCL2 inhibitor resistance

Vanessa Elaine Kennedy, Cheryl A.C. Peretz, Anushka Walia, Brenda Chyla, Yan Sun, Jason E. Hill, Elaine Tran, Andrew Koh, Timothy T. Ferng, Samantha M. Pintar, Matthew F. Jones, Bogdan Ovidiu Popescu, Natália Faraj Murad, Ritu Roy, Adam B. Olshen, , Catherine Choy Smith

bioRxiv · Feb 2, 2025 · PreprintCancer Biology